Genomictools: A computational platform for developing high-throughput analytics in genomics
- Aristotelis Tsirigos
- Niina Haiminen
- et al.
- 2011
- Bioinformatics
Publications
This is our catalog of publications authored by IBM researchers, in collaboration with the global research community. It’s an ever-growing body of work that shows why IBM is one of the most important contributors to modern computing.
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33 results for Niina Haiminen
Sequencing of a QTL-rich region of the Theobroma cacao genome using pooled BACs and the identification of trait specific candidate genes
- Frank A. Feltus
- Christopher A. Saski
- et al.
- 2011
- BMC Genomics
Assessing pooled BAC and whole genome shotgun strategies for assembly of complex genomes
- Niina Haiminen
- Frank A. Feltus
- et al.
- 2011
- BMC Genomics
Determining significance of pairwise co-occurrences of events in bursty sequences
- Niina Haiminen
- Heikki Mannila
- et al.
- 2008
- BMC Bioinformatics
Phylogeny-Aware Analysis of Metagenome Community Ecology Based on Matched Reference Genomes while Bypassing Taxonomy
- Qiyun Zhu
- Shi Huang
- et al.
- 2022
- mSystems
Efficient computation of Faith's phylogenetic diversity with applications in characterizing microbiomes
- George Armstrong
- Kalen Cantrell
- et al.
- 2021
- Genome Research
DNA extraction and host depletion methods significantly impact and potentially bias bacterial detection in a biological fluid
- Erika Ganda
- Kristen L. Beck
- et al.
- 2021
- mSystems
Utilizing stability criteria in choosing feature selection methods yields reproducible results in microbiome data
- Lingjing Jiang
- Niina Haiminen
- et al.
- 2021
- Biometrics
Hierarchically Labeled Database Indexing Allows Scalable Characterization of Microbiomes
- Filippo Utro
- Niina Haiminen
- et al.
- 2020
- iScience
Linear time algorithms to construct populations fitting multiple constraint distributions at genomic scales
- Enrico Siragusa
- Niina Haiminen
- et al.
- 2019
- IEEE/ACM TCBB